The detailed information of tRNA gene sequence


Sequence ID>WENV180039707
Genome IDLLBY010132336
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 196
End posion on genome 285
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attgctcggc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGAACGCCTCGAAAGCGTTTGTGGGCGCAAGTCCA
CCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
gccagccgaa
Secondary structure (Cloverleaf model)
>WENV180039707	Ser	CGA
                   c      GCCA gccagccgaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGCGCAAGTCCACC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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