The detailed information of tRNA gene sequence


Sequence ID>WENV180039775
Genome IDLLBY010157253
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1023
End posion on genome 948
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGCCCATAGCTCAATTGGCAGAGCCCCCGGCTCATAACCGGTCCGGTCTTGGTTCGAGT
CCAAGTGGGCCCACCA
Downstream region at tRNA end position 
cccggccccc
Secondary structure (Cloverleaf model)
>WENV180039775	Ile2	CAT
                   c      ACCA cccggccccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     CCGGT
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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