The detailed information of tRNA gene sequence


Sequence ID>WENV180039822
Genome IDLLBY010174409
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5413
End posion on genome 5488
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
atattgtcgg
tRNA gene sequence 
GGGCCCATAGCTCAGCCTGGTTAGAGCAATCGGCTCATAACCGAGAGGTCCCAGGTTCAA
ATCCTGGTGGGCCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180039822	Ile2	CAT
                   g      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G T C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGGTC
                    A   G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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