The detailed information of tRNA gene sequence


Sequence ID>WENV180039872
Genome IDLLBY010195372
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 263
End posion on genome 190
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCACAGGTTCGAGT
CCTGTTCCCGCTACta
Downstream region at tRNA end position 
agctcggctt
Secondary structure (Cloverleaf model)
>WENV180039872	fMet	CAT
                   t      ACta agctcggctt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     T G T C C     A
      T G A        G      | | | | |     G
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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