The detailed information of tRNA gene sequence


Sequence ID>WENV180039905
Genome IDLLBY010211297
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2397
End posion on genome 2482
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccccaaccac
tRNA gene sequence 
GGAGGGGTCGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGGGCGCAAGTCCTC
GAGGGTTCGAATCCCTCTCCCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180039905	Ser	GGA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G A G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGCGCAAGTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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