The detailed information of tRNA gene sequence


Sequence ID>WENV180039960
Genome IDLLBY010250980
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1338
End posion on genome 1261
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcaccttcct
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGCAGAGTGCTCGGTTCGGGACCGAGAGGTTCGTGGGTTCAA
ATCCCACCACCCCGACCA
Downstream region at tRNA end position 
ttccaaggtc
Secondary structure (Cloverleaf model)
>WENV180039960	Pro	CGG
                   t      ACCA ttccaaggtc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T G G G     C
    T       | | | +                 T T
    G       G A G T
      G C A        G     AGGTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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