The detailed information of tRNA gene sequence


Sequence ID>WENV180039982
Genome IDLLBY010274172
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 475
End posion on genome 399
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attttgtttT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCC
Downstream region at tRNA end position 
cgtcgggggc
Secondary structure (Cloverleaf model)
>WENV180039982	Trp	CCA
                   T      GCCC cgtcgggggc
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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