The detailed information of tRNA gene sequence


Sequence ID>WENV180040020
Genome IDLLBY010302143
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 946
End posion on genome 850
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGGAGTGGATGGGGCCTGGTGGCTTCCGTCGTCTTCAAAACGGCTGTGACCCGACTCCGT
CGGGCCGGGTGGGTTCGATTCCCGCACGCTCCCGCCA
Downstream region at tRNA end position 
cgcgatcctc
Secondary structure (Cloverleaf model)
>WENV180040020	SeC	TCA
                   t      GCCA cgcgatcctc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G   A          T T
                    A     C G C C C     A
      T C C        T      | + | | |     G
    G       G G G G       G T G G G     C
    G       | + + |                 T T
    T       C T T C
      G G          C     TGTGACCCGACTCCGTCGGGCCGG
                    G - C
                    T + G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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