The detailed information of tRNA gene sequence


Sequence ID>WENV180040022
Genome IDLLBY010304561
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 422
End posion on genome 326
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtttctggga
tRNA gene sequence 
GACCGGTTTCGGGAGCTGGCGCTCCCCGCGGGCTGCAAACCCGTCGAGCGTCGCCTGACC
GCGCCGCTGCTGGGTTCGATTCCCAGCCCGGTCTCCA
Downstream region at tRNA end position 
cttcagccgc
Secondary structure (Cloverleaf model)
>WENV180040022	Cys	GCA
                   a      TCCA cttcagccgc
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C
                     T   C          T T
                    T     G A C C C     A
      C G A        T      | | | | |     G
    T       G G G C       C T G G G     C
    G       + | |                   T T
    G       T C C C
      C G C        C     CGAGCGTCGCCTGACCGCGCCGCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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