The detailed information of tRNA gene sequence


Sequence ID>WENV180040059
Genome IDLLBY010352345
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 109
End posion on genome 33
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
attgaatcag
tRNA gene sequence 
GGATCAGTAGCTCAGTTGGTTAGAGCAGCCCGCTCATAACGGGTTGGTCCTAGGTTCGAG
TCCTAGCTGGTCCACCA
Downstream region at tRNA end position 
tttagctcag
Secondary structure (Cloverleaf model)
>WENV180040059	Ile2	CAT
                   g      ACCA tttagctcag
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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