The detailed information of tRNA gene sequence


Sequence ID>WENV180040077
Genome IDLLBY010367752
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 351
End posion on genome 264
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaccgccat
tRNA gene sequence 
GGAGAGGTGGCAGAGTCAGGTCGATTGCACCGCGTTGGAAACGCGGAGGTCCGCTGTGAC
CCGCAGGTTCAAATCCTGTCCTCTCCGCaa
Downstream region at tRNA end position 
gcagtagaaa
Secondary structure (Cloverleaf model)
>WENV180040077	Ser	GGA
                   t      GCaa gcagtagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        G      + | | | |     A
  A         G A C G       G C A G G     C
  G         + | | |                 T T
  G         T T G C
    T C G A        A     AGGTCCGCTGTGACCC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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