The detailed information of tRNA gene sequence


Sequence ID>WENV180040080
Genome IDLLBY010369818
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1152
End posion on genome 1059
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gccgcgccga
tRNA gene sequence 
GGGGCCGCAGGGTGGCTGGTGCTGCCTCTGATCTTCAAAATCAGCGAGGGCGGGGAAGAC
CCGCCCTGGTGGGTTCGATTCCCACGCGGTCCCGttc
Downstream region at tRNA end position 
ccgcgccccc
Secondary structure (Cloverleaf model)
>WENV180040080	SeC	TCA
                   a      Gttc ccgcgccccc
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G          T T
                    A     C A C C C     A
      T C G        G      | | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    T       T G C C
      G C          T     CGAGGGCGGGGAAGACCCGCCCTG
                    C - G
                    T - A
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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