The detailed information of tRNA gene sequence


Sequence ID>WENV180040134
Genome IDLLBY010403456
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 189
End posion on genome 96
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcttaggt
tRNA gene sequence 
CGCGGAGTAGAGGAACCCGGTTATCTCGCTCGGTTCATACCCGAGGCTGGCCCAAAGAGT
GGCCTATGATGGTTCAAATCCATCCTCCGCAACCt
Downstream region at tRNA end position 
aagccgtcat
Secondary structure (Cloverleaf model)
>WENV180040134	Met	CAT
                   t      ACCt aagccgtcat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T A C C     A
    C C A A        A      | | | | |     A
  C         G G A G       G A T G G     C
  G         + | | |                 T T
  G         T C T C
    T T A          G     GCTGGCCCAAAGAGTGGCCTAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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