The detailed information of tRNA gene sequence


Sequence ID>WENV180040149
Genome IDLLBY010425383
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 388
End posion on genome 476
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actgcgcggC
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGCCGAACGGGCTTGACTCGAAATCAAGTGTACGGGTGACCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGNnn
Downstream region at tRNA end position 
nnnnnnggat
Secondary structure (Cloverleaf model)
>WENV180040149	Ser	CGA
                   C      GNnn nnnnnnggat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACGGGTGACCGTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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