The detailed information of tRNA gene sequence


Sequence ID>WENV180040199
Genome IDLLBY010495270
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2233
End posion on genome 2146
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atccgcatat
tRNA gene sequence 
GGAAGTATGGCAGAGTCCGGTTTATTGCGTCAGTCTTGAAAACTGAAGGGTGTAAAAGCC
CCGGGGGTTCGAATCCCTCTACTTCCTCtt
Downstream region at tRNA end position 
ccttaaggag
Secondary structure (Cloverleaf model)
>WENV180040199	Ser	TGA
                   t      TCtt ccttaaggag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        G     AGGGTGTAAAAGCCCC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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