The detailed information of tRNA gene sequence


Sequence ID>WENV180040231
Genome IDLLBY010535873
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3801
End posion on genome 3890
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
taagtatttA
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTCTATGGTAGCAGTTTACTAAACTGTCGGTTGCTTTAAGTGA
CCCGCGAGTTCGAATCTCGCCCTCTNNNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180040231	Ser	ACT
                   A      NNnn nnnnnnnnnn
                     G   N
                     G   N
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G A G     C
    G       + | | |                 T T
    T       T G G T
      C T A        A     CGGTTGCTTTAAGTGACCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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