The detailed information of tRNA gene sequence


Sequence ID>WENV180040272
Genome IDLLBY010612019
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1056
End posion on genome 1129
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ataaataata
tRNA gene sequence 
AGGCTTATAGTTTAATTGGTTAGAGCATACCGCTCATAACGGTGTAGTTGTAGGTTCAAA
TCCTACTAGGCCTAatt
Downstream region at tRNA end position 
ttatttaata
Secondary structure (Cloverleaf model)
>WENV180040272	Ile2	CAT
                   a      Aatt ttatttaata
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     A - T          T A
                    T     C A T C C     A
      T A A        A      | | | | |     A
    T       T T T G       G T A G G     C
    G       + | + |                 T T
    G       G A G C
      T T A        A     TAGTT
                    T + G
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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