The detailed information of tRNA gene sequence


Sequence ID>WENV180040331
Genome IDLLBY010693044
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 214
End posion on genome 287
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgtcctctcc
tRNA gene sequence 
GGCGCGGTGGGAGAGTGGCCATCCAGCGGACTGCAAATCCGTTCACGCCGGTTCGAATCC
GGCCCGCGCCTCCA
Downstream region at tRNA end position 
ctgctcacgt
Secondary structure (Cloverleaf model)
>WENV180040331	Cys	GCA
                   c      TCCA ctgctcacgt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G A G G       G C C G G     C
      G       | | |                 T T
      G     A T C C
        C C        A     TCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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