The detailed information of tRNA gene sequence


Sequence ID>WENV180040347
Genome IDLLBY010730679
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 555
End posion on genome 649
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaggtttcgc
tRNA gene sequence 
GGAGGGAAAACGATCCTGGTGGATCGGCCGGGCTTCAAACCCGGTGGTTGGCGCCATGCG
CCGGCGGGTGGGTTCGACTCCCATTTCCCTCCGCCc
Downstream region at tRNA end position 
gggcattcgc
Secondary structure (Cloverleaf model)
>WENV180040347	SeC	TCA
                   c      GCCc gggcattcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    A     T A C C C     A
      T C C        A      + | | | |     G
    G       T A G C       G T G G G     C
    G       | | | |                 T T
    T       A T C G
      G G          G     TGGTTGGCGCCATGCGCCGGCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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