The detailed information of tRNA gene sequence


Sequence ID>WENV180040348
Genome IDLLBY010732620
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 117
End posion on genome 42
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaactctct
tRNA gene sequence 
GGGTGTATAGCTCTAATGGTAGAGCGGCTGATTCCAAATCAGTAGGTTGGGGGTTCGAAT
CCCTCTGCGCCCGCCA
Downstream region at tRNA end position 
ctccactgat
Secondary structure (Cloverleaf model)
>WENV180040348	Trp	CCA
                   t      GCCA ctccactgat
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     T + G
                     A - T          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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