The detailed information of tRNA gene sequence


Sequence ID>WENV180040415
Genome IDLLBY010863062
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1558
End posion on genome 1631
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctcggggctT
tRNA gene sequence 
GCCGCGGTCGTTCAAAGGCCAGGATGCCGCCCTGTCGAGGCGGAGATCGGGGTTCGATTC
CCCGTCGCGGCGTgc
Downstream region at tRNA end position 
ggctctcccc
Secondary structure (Cloverleaf model)
>WENV180040415	Asp	GTC
                   T      GTgc ggctctcccc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T          T T
                    T     G C C C C     A
      A A A        C      | | | | |     G
    G       C T T G       C G G G G     C
    G       | + | +                 T T
    C       G G A T
      C A          G     AGAT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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