The detailed information of tRNA gene sequence


Sequence ID>WENV180040418
Genome IDLLBY010868217
Search identical group
Phylum/Class[LLBY] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 38
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccattttt
tRNA gene sequence 
GGGTCGCTGGTGTAATTGGCAGCATGCGGGACTCCAAATCCCTGCGATAGAGGTTCGAGT
CCTCTGTGGCCCGCCA
Downstream region at tRNA end position 
tttcgggatc
Secondary structure (Cloverleaf model)
>WENV180040418	Trp	CCA
                   t      GCCA tttcgggatc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G + T
                     C - G          T G
                    T     T C T C C     A
      T A A        G      | | | | |     G
    T       T G T G       A G A G G     C
    G       + | | +                 T T
    G       G C A T
      C A          G     GCGAT
                    C   T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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