The detailed information of tRNA gene sequence


Sequence ID>WENV180040613
Genome IDLLBZ010002397
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 93114
End posion on genome 93029
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgctcgtat
tRNA gene sequence 
GGAGATGTGGCAGAGTGGCCTATTGCACTTCCCTGCTAAGGAAGAGGGTGTAAAAGCCCC
GCAGGTTCAAATCCTGTCATCTCCGCtt
Downstream region at tRNA end position 
tatggaaggt
Secondary structure (Cloverleaf model)
>WENV180040613	Ser	GCT
                   t      GCtt tatggaaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    G       G A C G       G C A G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        A     AGGGTGTAAAAGCCCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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