The detailed information of tRNA gene sequence


Sequence ID>WENV180040627
Genome IDLLBZ010002857
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3948
End posion on genome 3875
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGCTCCCGtct
Downstream region at tRNA end position 
tcgaagtccc
Secondary structure (Cloverleaf model)
>WENV180040627	Asp	GTC
                   n      Gtct tcgaagtccc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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