The detailed information of tRNA gene sequence


Sequence ID>WENV180040631
Genome IDLLBZ010002973
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 17529
End posion on genome 17456
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gggtccgcca
tRNA gene sequence 
AGCGGGATAGTGGAGAGGTACCACGCTGGGCTCATAACCCAGAAGTCGCAGGTTCGAATC
CTGCTCCCGCTACCg
Downstream region at tRNA end position 
tgacgagatc
Secondary structure (Cloverleaf model)
>WENV180040631	fMet	CAT
                   a      ACCg tgacgagatc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     G G T G       G C A G G     C
      G     | | | |                 T T
      G     C C A C
        T A        G     AAGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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