The detailed information of tRNA gene sequence


Sequence ID>WENV180040637
Genome IDLLBZ010003365
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 553
End posion on genome 651
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttcagctt
tRNA gene sequence 
GGAGGCGAATCTGTTCTGGTGAACGGCGCGGTCTTCAAAACCGTCAGTGAGACCGTGAGA
GCGGGCTCAGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
gcattgaaaa
Secondary structure (Cloverleaf model)
>WENV180040637	SeC	TCA
                   t      GCCA gcattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A T C C     A
      T C T        T      | | | | |     G
    G       T G T C       G T A G G     C
    G       | | + |                 T T
    T       A C G G
      G A          C     CAGTGAGACCGTGAGAGCGGGCTCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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