The detailed information of tRNA gene sequence


Sequence ID>WENV180040655
Genome IDLLBZ010004827
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 12970
End posion on genome 12883
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccatgccgcc
tRNA gene sequence 
GGAAGGGTGGCAGAGCGGTCGATTGCTCCGGTCTTGAAAACCGGTGGTGGGCAACCATCC
GTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
ccgacgcatg
Secondary structure (Cloverleaf model)
>WENV180040655	Ser	TGA
                   c      GCCA ccgacgcatg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        T     TGGTGGGCAACCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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