The detailed information of tRNA gene sequence


Sequence ID>WENV180040659
Genome IDLLBZ010005195
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5343
End posion on genome 5432
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctgcaaca
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCGAAGGTTTGCGCCTT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180040659	Ser	TGA
                   a      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAAGGTTTGCGCCTTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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