The detailed information of tRNA gene sequence


Sequence ID>WENV180040718
Genome IDLLBZ010008986
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1405
End posion on genome 1318
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtcgcgctc
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTAAGGGTGCAAGCTCT
TCGAGGGTTCAAATCCCTCCCCCTCCGCtt
Downstream region at tRNA end position 
cctctcgcag
Secondary structure (Cloverleaf model)
>WENV180040718	Ser	CGA
                   c      GCtt cctctcgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TAAGGGTGCAAGCTCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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