The detailed information of tRNA gene sequence


Sequence ID>WENV180040728
Genome IDLLBZ010009593
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 42470
End posion on genome 42386
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgagattatt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCATCGGGTAACCGATGCC
AGGGTTCGAGTCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
ataaattttg
Secondary structure (Cloverleaf model)
>WENV180040728	Ser	GCT
                   t      GCtt ataaattttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G G C C       C A G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CATCGGGTAACCGATGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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