The detailed information of tRNA gene sequence


Sequence ID>WENV180040739
Genome IDLLBZ010009998
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1094
End posion on genome 1170
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gcgctaggtg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCTGGCCGCTCATAACGGCTTGGTTGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cggcctggcc
Secondary structure (Cloverleaf model)
>WENV180040739	Ile2	CAT
                   g      ACCA cggcctggcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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