The detailed information of tRNA gene sequence


Sequence ID>WENV180040745
Genome IDLLBZ010010471
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 18628
End posion on genome 18531
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgcggtacc
tRNA gene sequence 
GGAAGCGTCTAGGATCCCGGTGGGCCTCCCGGACTTCAAATCCGGCGTCCGGCTCTAGAC
AAGTCGGAGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
tccggtcgtg
Secondary structure (Cloverleaf model)
>WENV180040745	SeC	TCA
                   c      GCCA tccggtcgtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    C     C A C C C     A
      C C T        T      | | | | |     G
    C       A G G A       G T G G G     C
    G         | | |                 T T
    G       G C C T
      T G G        C     CGTCCGGCTCTAGACAAGTCGGAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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