The detailed information of tRNA gene sequence


Sequence ID>WENV180040754
Genome IDLLBZ010011333
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2851
End posion on genome 2775
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgtgagtcac
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
atcacgaggc
Secondary structure (Cloverleaf model)
>WENV180040754	fMet	CAT
                   c      ACCA atcacgaggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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