The detailed information of tRNA gene sequence


Sequence ID>WENV180040758
Genome IDLLBZ010011698
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5291
End posion on genome 5365
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgctagga
tRNA gene sequence 
GCCGGTATCGTCTAGGGGTTAGGACGGGTGGTTCTCAGCCATCAAACCGGGGTTCGAATC
CCCGTACCGGTACCA
Downstream region at tRNA end position 
tccttcgcca
Secondary structure (Cloverleaf model)
>WENV180040758	Glu	CTC
                   a      ACCA tccttcgcca
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    G - C
                    G + T
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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