The detailed information of tRNA gene sequence


Sequence ID>WENV180040782
Genome IDLLBZ010014679
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5930
End posion on genome 6017
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatcttttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAACCTTTGCGGGT
TCCGTGGGTTCGAATCCCACTCTCGCCTttt
Downstream region at tRNA end position 
atttctaaat
Secondary structure (Cloverleaf model)
>WENV180040782	Ser	TGA
                   t      Tttt atttctaaat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAACCTTTGCGGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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