The detailed information of tRNA gene sequence


Sequence ID>WENV180040856
Genome IDLLBZ010018218
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2967
End posion on genome 3054
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtaaaatac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTATACCGCAAGGTATC
GAGGGTTCGACTCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
ttttaaaacg
Secondary structure (Cloverleaf model)
>WENV180040856	Ser	GGA
                   c      GCCA ttttaaaacg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T C
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATACCGCAAGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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