The detailed information of tRNA gene sequence


Sequence ID>WENV180040878
Genome IDLLBZ010020183
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 180
End posion on genome 104
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
NGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
ttgccggcct
Secondary structure (Cloverleaf model)
>WENV180040878	Ile	GAT
                   n      ACCA ttgccggcct
                     N   C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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