The detailed information of tRNA gene sequence


Sequence ID>WENV180040915
Genome IDLLBZ010023625
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 4922
End posion on genome 4837
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcacttctT
tRNA gene sequence 
GCAGAGGTCGCCTAGCTCGGTAGGGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACCCG
GGGGTTCAAATCCCTCTCTCTGCGTtt
Downstream region at tRNA end position 
ttatttttct
Secondary structure (Cloverleaf model)
>WENV180040915	Ser	TGA
                   T      GTtt ttatttttct
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    T       T C C G       G G G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTGCGCAAGCACCC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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