The detailed information of tRNA gene sequence


Sequence ID>WENV180040940
Genome IDLLBZ010026324
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 222
End posion on genome 309
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgcgccttc
tRNA gene sequence 
GGCGGGGTGCCGGAGCGGTCGAACGGGGCGGTCTTGAAAACCGTTGGGCGTGCAAGCGCC
CCGTGGGTTCGAATCCCACCCCCGCCGCtg
Downstream region at tRNA end position 
gttcgtccgc
Secondary structure (Cloverleaf model)
>WENV180040940	Ser	TGA
                   c      GCtg gttcgtccgc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGGGCGTGCAAGCGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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