The detailed information of tRNA gene sequence


Sequence ID>WENV180040968
Genome IDLLBZ010029565
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 13943
End posion on genome 14031
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attggtcaat
tRNA gene sequence 
GGAGAGGTGTCCGAGAGGTCGAAGGAGCATGCCTGGAAAGTATGTATGCCCCTAAAGGGT
ATCGAGGGTTCGAATCCCTTCCTCTCCGCag
Downstream region at tRNA end position 
gaataaaata
Secondary structure (Cloverleaf model)
>WENV180040968	Ser	GGA
                   t      GCag gaataaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      A G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATGCCCCTAAAGGGTATC
                    C - G
                    A - T
                    T - A
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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