The detailed information of tRNA gene sequence


Sequence ID>WENV180041009
Genome IDLLBZ010033574
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5241
End posion on genome 5317
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaacccccga
tRNA gene sequence 
AGGGGTGTAGCTCGAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGAG
TCCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gtctttgttt
Secondary structure (Cloverleaf model)
>WENV180041009	Trp	CCA
                   a      GCCA gtctttgttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      A A G        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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