The detailed information of tRNA gene sequence


Sequence ID>WENV180041048
Genome IDLLBZ010038025
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 9300
End posion on genome 9225
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cgcggaggac
tRNA gene sequence 
GGGCCCGTAGCTCAGTCGGTCAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCGAT
CCCAGCCGGGCCCACCc
Downstream region at tRNA end position 
catcaccgcg
Secondary structure (Cloverleaf model)
>WENV180041048	Ile2	CAT
                   c      ACCc catcaccgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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