The detailed information of tRNA gene sequence


Sequence ID>WENV180041049
Genome IDLLBZ010038039
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 4753
End posion on genome 4677
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGGGTGGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCCACCCCGCCA
Downstream region at tRNA end position 
caaaccctcg
Secondary structure (Cloverleaf model)
>WENV180041049	Asp	GTC
                   t      GCCA caaaccctcg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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