The detailed information of tRNA gene sequence


Sequence ID>WENV180041059
Genome IDLLBZ010038795
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 4086
End posion on genome 4173
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgcggtcgc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCCTGACTCGAAATCAGGTTTAGGGCAACCTAAC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtcaccctcg
Secondary structure (Cloverleaf model)
>WENV180041059	Ser	CGA
                   c      GCCA gtcaccctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTTAGGGCAACCTAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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