The detailed information of tRNA gene sequence


Sequence ID>WENV180041082
Genome IDLLBZ010041570
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1926
End posion on genome 1854
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position
tgtttagtaa
tRNA gene sequence
GCCCCCATCGTCTAGTGGCCCAGGACGTGGCCCTCTCAAGGCCAAAACCGGAGTTCGAGT
CTCCGTGGGGGCAtca
Downstream region at tRNA end position
atttcccgga
Secondary structure (Cloverleaf model)
>WENV180041082	Glu	CTC
                   a      Atca atttcccgga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G C C T C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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