The detailed information of tRNA gene sequence


Sequence ID>WENV180041116
Genome IDLLBZ010046271
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 5868
End posion on genome 5957
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccgcgcgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCTAAGGAGCGCGACTGGAAATCGCGTACGGGCCGAAACGTC
CGTCGCGGGTTCAAATCCCGCCCTCTCCGCtt
Downstream region at tRNA end position 
cgagcacggg
Secondary structure (Cloverleaf model)
>WENV180041116	Ser	GGA
                   c      GCtt cgagcacggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TACGGGCCGAAACGTCCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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