The detailed information of tRNA gene sequence


Sequence ID>WENV180041192
Genome IDLLBZ010061927
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1433
End posion on genome 1358
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttcaagagt
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGTGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGAGG
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ccgtttaggt
Secondary structure (Cloverleaf model)
>WENV180041192	Trp	CCA
                   t      GCCA ccgtttaggt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          G G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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