The detailed information of tRNA gene sequence


Sequence ID>WENV180041199
Genome IDLLBZ010063065
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 220
End posion on genome 145
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cgatcaggtg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGAGGTTCGAGT
CCTCCCGGGCCCACCA
Downstream region at tRNA end position 
cgcagtcctg
Secondary structure (Cloverleaf model)
>WENV180041199	Ile2	CAT
                   g      ACCA cgcagtcctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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