The detailed information of tRNA gene sequence


Sequence ID>WENV180041305
Genome IDLLBZ010090641
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 781
End posion on genome 687
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtatcgccgt
tRNA gene sequence 
GGAGGAGTAACCGGGGCGGTCTCCGGCGCGGTCTTCAAAACCGTTGAGGGGCGTAGGACG
TTCCTGGTGGGTTCGACTCCCACACTCTTCCGCCA
Downstream region at tRNA end position 
gttgccccgg
Secondary structure (Cloverleaf model)
>WENV180041305	SeC	TCA
                   t      GCCA gttgccccgg
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    A     C A C C C     A
      C G G        A      | | | | |     G
    G       G G C C       G T G G G     C
    G       | | | |                 T T
    T       C C G G
      C T          C     TGAGGGGCGTAGGACGTTCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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