The detailed information of tRNA gene sequence


Sequence ID>WENV180041477
Genome IDLLBZ010152672
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 260
End posion on genome 187
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnntcc
tRNA gene sequence 
AGCCTCGTAGCTCAGGGGCTAAGAGCATCCCTCTGATAAGGGGAAGGTCGTCAGTTCGAT
CCTGACCGAGGCTAtag
Downstream region at tRNA end position 
ccggcttcgt
Secondary structure (Cloverleaf model)
>WENV180041477	Ile	GAT
                   c      Atag ccggcttcgt
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C A G T C     A
      G G A        A      | | | | |     G
    G       C T C G       G T C A G     C
    G       | | | |                 T T
    C       G A G C
      T A A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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